Basic Information
Locus ID:
gene_3826
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 5993681 | 6000130 | - | gene_3826 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 56,558.34 Da | 55.99 | 49.19 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 232 | 288 | 2.5E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 407 | 463 | 3.4E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 398 | 466 | 1.7E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 228 | 290 | 1.83E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 218 | 291 | 2.3E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 393 | 459 | 3.5E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 231 | 289 | 3.6E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 406 | 465 | 6.6E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 401 | 466 | 37.653969 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 226 | 290 | 23.835178 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 355 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_021739996.1 | probable WRKY transcription factor 3 [Chenopodium quinoa] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9DC04 | WRKY transcription factor 3 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology