Basic Information
Locus ID:
gene_3743
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 38514872 | 38516244 | - | gene_3743 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.66 | 48,003.57 Da | 45.99 | 85.58 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 97 | 444 | 1.11442E-86 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 289 | 440 | 5.4E-28 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 97 | 267 | 7.5E-53 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 93 | 444 | 4.33E-88 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 78 | 262 | 3.1E-50 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 263 | 448 | 2.3E-45 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 97 | 440 | 43.008419 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 112 | 123 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 325 | 336 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 325 | 336 | 6.4E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 103 | 123 | 6.4E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_002266533.1 | PREDICTED: aspartic proteinase CDR1-like [Vitis vinifera] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | F6HJ52 | Peptidase A1 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_02s0087g00220 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology