Basic Information
Locus ID:
gene_3677
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 3553075 | 3559734 | - | gene_3677 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 50,015.78 Da | 68.48 | 76.89 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10536 | Plant mobile domain | 89 | 227 | 1.5E-17 | IPR019557 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 453 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48120.1 | hydrolases;protein serine/threonine phosphatases. | 0 |
| RefSeq | XP_021835289.1 | serine/threonine-protein phosphatase 7 long form homolog [Spinacia oleracea] | 0 |
| Q9LNG5 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J4VCU9 | PMD domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_018211 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_22859, gene_3677, gene_6214 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah006596, Ah026904, Ah033066 |
| Amaranthaceae | Salicornia bigelovii | 69 | Sbi_jg10574, Sbi_jg13161, Sbi_jg14289, Sbi_jg1461, Sbi_jg387 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15751, Seu_jg21945 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026342 |
| Apiaceae | Apium graveolens | 1 | Ag9G00627 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G10686, Lb3G16601 |
| Poaceae | Oryza coarctata | 2 | Oco13G014430, Oco16G012190 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132599869, gene-LOC132609715, gene-LOC132622063 |
| Solanaceae | Solanum chilense | 2 | SOLCI003030300, SOLCI005764100 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC114074771, gene-LOC114075281, gene-LOC114078436 |