Basic Information
Locus ID:
gene_3624
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_10_Chr_8 | 2677805 | 2685338 | - | gene_3624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 78,158.66 Da | 35.91 | 97.17 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 207 | 265 | 2.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 117 | 154 | 2.2E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 388 | 658 | 2.2E-42 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 116 | 276 | 3.16E-36 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 366 | 661 | 1.2E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 355 | 463 | 8.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 679 | 6.3E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 114 | 296 | 4.1E-53 | IPR032675 |
| SMART | SM00220 | serkin_6 | 387 | 660 | 1.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 670 | 35.19862 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 393 | 415 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 510 | 522 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 669 | 683 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 669 | 697 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_010682518.2 | protein NSP-INTERACTING KINASE 3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RYF9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_019340 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology