Basic Information
Locus ID:
gene_3564
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 18960368 | 18980660 | - | gene_3564 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 60,616.20 Da | 48.80 | 80.28 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 91 | 317 | 3.3E-67 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 376 | 525 | 3.7E-48 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 377 | 491 | 3.0E-82 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 100 | 376 | 3.4E-99 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 492 | 528 | 3.0E-82 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 200 | 234 | 9.54735 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 100 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_010669732.2 | proteinaceous RNase P 1, chloroplastic/mitochondrial [Beta vulgaris subsp. vulgaris] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5BSF3 | ribonuclease P OS=Nyssa sinensis OX=561372 GN=F0562_020350 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology