Basic Information
Locus ID:
gene_3436
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 9105913 | 9107760 | - | gene_3436 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.53 | 68,886.81 Da | 46.23 | 92.11 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 188 | 232 | 0.074 | IPR018392 |
| Pfam | PF01476 | LysM domain | 67 | 106 | 3.0E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 354 | 609 | 4.9E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 326 | 609 | 2.49E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 410 | 615 | 7.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 408 | 3.4E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 341 | 615 | 30.279987 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 186 | 231 | 8.788754 | IPR018392 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 305 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_002269408.1 | PREDICTED: lysM domain receptor-like kinase 4 [Vitis vinifera] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438CVC3 | LysM domain receptor-like kinase 4 OS=Vitis vinifera OX=29760 GN=LYK4_3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology