Basic Information
Locus ID:
gene_3435
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 9057867 | 9075832 | - | gene_3435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 71,731.59 Da | 45.31 | 91.04 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 187 | 231 | 0.0011 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 380 | 626 | 1.0E-35 | IPR001245 |
| Pfam | PF01476 | LysM domain | 67 | 105 | 0.16 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 343 | 626 | 3.46E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 642 | 2.3E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 425 | 9.2E-17 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 174 | 245 | 3.5E-6 | IPR036779 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 185 | 230 | 10.057201 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 341 | 630 | 30.237585 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 471 | 483 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 259 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_048501773.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9F754 | LysM domain receptor-like kinase 4 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology