Basic Information
Locus ID:
gene_3126
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine protein kinase IRE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 42030470 | 42043314 | - | gene_3126 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 131,487.48 Da | 48.31 | 81.60 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 770 | 1056 | 3.97386E-170 | - |
| Pfam | PF00069 | Protein kinase domain | 764 | 1051 | 4.3E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 749 | 1082 | 9.85E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 762 | 1079 | 2.1E-108 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 848 | 1069 | 2.1E-108 | - |
| SMART | SM00220 | serkin_6 | 764 | 1051 | 1.0E-105 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 764 | 1051 | 51.466854 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1052 | 1157 | 9.247965 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 883 | 895 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 950 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 725 | 754 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 450 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 633 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 925 | 950 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_010672008.2 | probable serine/threonine protein kinase IRE isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A0J8CQP3 | Protein kinase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_3g055890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology