Basic Information
Locus ID:
gene_2942
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 38711261 | 38726547 | - | gene_2942 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.63 | 85,037.59 Da | 52.09 | 71.59 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 496 | 742 | 2.11463E-130 | - |
| CDD | cd00130 | PAS | 127 | 228 | 2.10301E-13 | IPR000014 |
| Pfam | PF13426 | PAS domain | 131 | 229 | 6.9E-14 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 490 | 742 | 3.4E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 477 | 741 | 7.82E-85 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 122 | 225 | 2.62E-19 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 568 | 766 | 6.5E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 483 | 567 | 1.2E-30 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 127 | 232 | 5.7E-24 | - |
| SMART | SM00220 | serkin_6 | 490 | 750 | 1.9E-60 | IPR000719 |
| SMART | SM00091 | pas_2 | 118 | 185 | 8.8E-9 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 118 | 228 | 6.1E-14 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 116 | 187 | 16.960033 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 490 | 750 | 43.947567 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 609 | 621 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 564 | 577 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 713 | 735 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 669 | 691 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 650 | 660 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 603 | 621 | 2.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 373 | - | - |
| Coils | Coil | Coil | 7 | 27 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021730341.1 | tyrosine-protein kinase receptor UFO-like [Chenopodium quinoa] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N2C5 | PAS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology