Basic Information
Locus ID:
gene_291
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 4981429 | 4985552 | - | gene_291 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 108,613.75 Da | 32.85 | 100.89 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 112 | 131 | 0.78 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 58 | 2.0E-11 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 568 | 588 | 0.97 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 137 | 156 | 0.61 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 683 | 938 | 1.5E-42 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 354 | 589 | 8.33E-50 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 67 | 413 | 3.37E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 671 | 961 | 1.48E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 665 | 768 | 1.9E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 196 | 6.5E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 207 | 613 | 5.6E-109 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 769 | 981 | 7.3E-61 | - |
| SMART | SM00220 | serkin_6 | 681 | 948 | 1.3E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 965 | 36.188 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 710 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 813 | 825 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010686396.1 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QY06 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_128600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology