Basic Information
Locus ID:
gene_2828
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
BTB POZ and TAZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 35678001 | 35685173 | - | gene_2828 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 42,527.44 Da | 49.73 | 90.05 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 159 | 219 | 1.20905E-6 | - |
| Pfam | PF00651 | BTB/POZ domain | 51 | 153 | 2.4E-8 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 241 | 326 | 3.1E-11 | IPR000197 |
| SUPERFAMILY | SSF57933 | TAZ domain | 234 | 335 | 3.79E-21 | IPR035898 |
| SUPERFAMILY | SSF54695 | POZ domain | 37 | 153 | 3.77E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 158 | 232 | 8.8E-14 | - |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 233 | 356 | 2.1E-22 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 31 | 156 | 5.6E-15 | IPR011333 |
| SMART | SM00551 | TAZ_2 | 234 | 327 | 1.5E-31 | IPR000197 |
| SMART | SM00225 | BTB_4 | 57 | 157 | 9.3E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 57 | 125 | 9.165172 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | XP_010672473.2 | BTB/POZ and TAZ domain-containing protein 3 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QP31 | BTB domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_157730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology