Basic Information
Locus ID:
gene_2755
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CIPK17
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 33351488 | 33358454 | - | gene_2755 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.58 | 50,507.19 Da | 37.74 | 95.92 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 318 | 427 | 3.36454E-36 | - |
| Pfam | PF00069 | Protein kinase domain | 19 | 274 | 6.5E-74 | IPR000719 |
| Pfam | PF03822 | NAF domain | 314 | 373 | 5.7E-16 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 16 | 293 | 2.43E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 316 | 432 | 2.1E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 13 | 315 | 3.5E-104 | - |
| SMART | SM00220 | serkin_6 | 19 | 274 | 6.9E-106 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 312 | 336 | 11.867236 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 19 | 274 | 52.074615 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 25 | 48 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 138 | 150 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17510.1 | CBL-interacting protein kinase 1. Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2. | 0 |
| RefSeq | XP_021752226.1 | CBL-interacting serine/threonine-protein kinase 1-like [Chenopodium quinoa] | 0 |
| Q8RWC9 | CBL-interacting serine/threonine-protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CIPK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9RJX8 | non-specific serine/threonine protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_058140 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg11296, jg5601 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_2755 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah019896 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg38219, Sbi_jg6352 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15501 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00003682 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl01634, Sgl06796 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000012699, gene:ENSEOMG00000030852 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0012420, CQ.Regalona.r1.3BG0012470 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30231690 |
| Apiaceae | Apium graveolens | 1 | Ag9G01960 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G000320, COCNU_01G015480 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103707696, gene-LOC103718157, gene-LOC103720051 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G29393 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G48260.1, AT3G17510.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011509m.g.v1.0, Thhalv10020722m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g35210.v2.2, Sp3g15670.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g047290.2N, BniB04g062850.2N, BniB07g007900.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1430 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl09G1520 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g06350, gene.Cymno05g06940 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g15880 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.1453 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00019443 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G04341, Lb1G04342 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.1357, AH03.3833, AH05.828, BH02.1412, BH03.4117 ... |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_1AG0013670, gene-QOZ80_1BG0062460 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.1HG0017930.1, HORVU.MOREX.r3.1HG0017980.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_009372, gene-QYE76_009373, gene-QYE76_039359 ... |
| Poaceae | Oryza coarctata | 5 | Oco01G008550, Oco02G008730, Oco10G001810, Oco13G013770 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os01g18800.1, LOC_Os05g04550.1, LOC_Os07g44290.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_02G365100, gene-BS78_03G127700 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0304811, Pt_Chr0500347, Pt_Chr0500452, Pt_Chr0603685 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr02G021430, Chr03G006780, Chr05G012270, Chr08G007170 ... |
| Poaceae | Thinopyrum elongatum | 4 | Tel1E01G159500, Tel1E01G159600, Tel1E01G161000 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC1AG011290, gene_TRIDC1AG011310 ... |
| Poaceae | Triticum aestivum | 11 | TraesCS1A02G080500.2, TraesCS1A02G080600.1 ... |
| Poaceae | Zea mays | 4 | Zm00001eb110020_P001, Zm00001eb129820_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-13426, nbis-gene-6619 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g10172, Zma_g26384, Zma_g6934, Zma_g7839 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.1589, evm.TU.LG11.947 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g13810 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.1247 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14896 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-1074 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000011l.803 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00007524 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13497 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-4001 |
| Salicaceae | Populus euphratica | 1 | populus_peu22341 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132604467, gene-LOC132640312 |
| Solanaceae | Solanum chilense | 2 | SOLCI002769900, SOLCI007429700 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107007202, gene-LOC107020275 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.14494_chr08_+ |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G1340, TC12G1743 |
| Zosteraceae | Zostera marina | 2 | Zosma02g20830.v3.1, Zosma03g17770.v3.1 |