Basic Information
Locus ID:
gene_2717
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 4365925 | 4394868 | + | gene_2717 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 45,914.42 Da | 42.00 | 79.05 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 331 | 370 | 3.4E-7 | IPR002893 |
| SUPERFAMILY | SSF81383 | F-box domain | 58 | 112 | 4.58E-5 | IPR036047 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 326 | 373 | 8.02E-9 | - |
| SUPERFAMILY | SSF81901 | HCP-like | 129 | 245 | 4.45E-12 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 320 | 372 | 1.1E-9 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 121 | 282 | 7.1E-17 | IPR011990 |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 328 | 370 | 10.9113 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 420 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_021976018.1 | F-box protein At1g67340 [Helianthus annuus] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251U2M4 | Putative F-box domain, Zinc finger, MYND-type, Tetratricopeptide-like helical domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0207811 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology