Basic Information
Locus ID:
gene_26704
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 37160400 | 37165298 | + | gene_26704 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 49,640.02 Da | 38.98 | 111.50 | 0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 8 | 423 | 2.26819E-59 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 8 | 383 | 5.6E-27 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 5 | 418 | 6.93E-40 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 2 | 420 | 3.4E-45 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 4 | 429 | 12.058069 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 367 | 390 | 8.5E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 306 | 327 | 8.5E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 54 | 70 | 8.5E-5 | IPR001958 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 218 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_010690317.1 | hippocampus abundant transcript 1 protein [Beta vulgaris subsp. vulgaris] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QD99 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_192340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology