Basic Information
Locus ID:
gene_26641
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 36130484 | 36135996 | + | gene_26641 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 103,581.61 Da | 33.88 | 90.08 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 604 | 877 | 5.03918E-97 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 334 | 370 | 2.6E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 389 | 433 | 3.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 599 | 870 | 2.5E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 67 | 1.8E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 586 | 887 | 7.14E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 447 | 4.42E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 332 | 2.9E-82 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 560 | 675 | 4.2E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 676 | 892 | 9.6E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 458 | 5.1E-36 | IPR032675 |
| SMART | SM00220 | serkin_6 | 598 | 878 | 5.0E-43 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 396 | 420 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 265 | 288 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 115 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 8.7E-4 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 118 | 139 | 7.457832 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 598 | 878 | 39.679096 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 723 | 735 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 604 | 636 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_010690479.2 | receptor protein kinase TMK1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RDC0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology