Basic Information
Locus ID:
gene_26270
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 30184307 | 30194778 | + | gene_26270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 71,148.65 Da | 48.69 | 77.79 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 505 | 547 | 2.56E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 33 | 257 | 8.45E-8 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 499 | 554 | 3.4E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 604 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_021866448.1 | uncharacterized protein LOC110805132 isoform X1 [Spinacia oleracea] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9RUR0 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_026500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology