Basic Information
Locus ID:
gene_26212
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 29498356 | 29503213 | + | gene_26212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 40,717.18 Da | 38.82 | 91.41 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 46 | 313 | 2.18902E-107 | - |
| Pfam | PF00069 | Protein kinase domain | 41 | 309 | 2.4E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 22 | 311 | 1.12E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 115 | 9.1E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 116 | 326 | 3.7E-62 | - |
| SMART | SM00220 | serkin_6 | 40 | 311 | 3.6E-32 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 10 | 319 | 7.7E-38 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 320 | 37.926483 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 68 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 362 | - | - |
| Coils | Coil | Coil | 305 | 325 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010691096.2 | PTI1-like tyrosine-protein kinase At3g15890 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P6RW10 | Putative non-specific protein-tyrosine kinase RLK-Pelle-RLCK-XV family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0135221 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology