Basic Information
Locus ID:
gene_26164
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
IAA15
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 28752152 | 28753879 | + | gene_26164 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 22,404.28 Da | 51.44 | 65.92 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 33 | 195 | 5.3E-57 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 86 | 185 | 4.51E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 88 | 198 | 1.3E-40 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 94 | 186 | 21.908524 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.1 | indole-3-acetic acid inducible 14. IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. | 0 |
| RefSeq | XP_021736793.1 | auxin-responsive protein IAA1-like [Chenopodium quinoa] | 0 |
| Q5VRD1 | Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RYZ3 | Auxin-responsive protein OS=Spinacia oleracea OX=3562 GN=SOVF_018400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology