Basic Information
Locus ID:
gene_26040
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 26348020 | 26352088 | + | gene_26040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.58 | 59,818.05 Da | 36.88 | 72.63 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 33 | 464 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 44 | 184 | 7.2E-20 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 300 | 464 | 1.5E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 475 | 4.05E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 465 | 3.6E-80 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 20 | 126 | 6.0E-41 | - |
| SMART | SM00220 | serkin_6 | 44 | 464 | 5.9E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 44 | 464 | 31.014956 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 171 | 183 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 50 | 73 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 500 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034687459.1 | serine/threonine-protein kinase SRPK [Vitis riparia] | 0 |
| Q45FA5 | Serine/threonine-protein kinase SRPK OS=Physarum polycephalum OX=5791 PE=1 SV=1 | 0 | |
| TrEMBL | F6GW67 | Protein kinase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g01050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology