Basic Information
Locus ID:
gene_25838
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 22094235 | 22102499 | + | gene_25838 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 45,213.80 Da | 38.19 | 93.79 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 36 | 186 | 1.9E-18 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 33 | 186 | 7.2E-24 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 35 | 197 | 1.2E-26 | IPR036465 |
| SMART | SM00327 | VWA_4 | 34 | 203 | 1.4E-18 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 36 | 208 | 16.434151 | IPR002035 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_028111069.1 | E3 ubiquitin-protein ligase WAV3-like [Camellia sinensis] | 0 |
| TrEMBL | A0A7J7FX66 | VWFA domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_029106 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology