Basic Information
Locus ID:
gene_25568
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 8624927 | 8633525 | + | gene_25568 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 89,816.19 Da | 39.61 | 79.80 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 100 | 295 | 3.73923E-98 | - |
| Pfam | PF00183 | Hsp90 protein | 278 | 758 | 5.8E-191 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 113 | 274 | 6.9E-12 | IPR003594 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 632 | 752 | 4.71E-33 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 351 | 609 | 1.06E-88 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 90 | 305 | 3.64E-61 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 349 | 521 | 5.9E-69 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 609 | 756 | 2.5E-50 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 79 | 319 | 4.8E-87 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 522 | 608 | 3.7E-34 | - |
| SMART | SM00387 | HKATPase_4 | 113 | 275 | 9.1E-4 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 65 | 787 | 3.3E-240 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 111 | 120 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 179 | 196 | 6.8E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 208 | 230 | 6.8E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 161 | 178 | 6.8E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 91 | 111 | 6.8E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 281 | 299 | 6.8E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 263 | 280 | 6.8E-65 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 112 | 134 | 6.8E-65 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 88 | 753 | 26.047863 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 793 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_010665948.1 | heat shock protein 90-6, mitochondrial [Beta vulgaris subsp. vulgaris] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DAA0 | Adenosinetriphosphatase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology