Basic Information
Locus ID:
gene_25439
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_5_Chr_4 | 3487480 | 3496648 | + | gene_25439 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 56,376.57 Da | 39.28 | 93.78 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 191 | 457 | 4.39931E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 187 | 454 | 1.9E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 169 | 459 | 2.16E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 261 | 475 | 1.1E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 167 | 260 | 2.6E-35 | - |
| SMART | SM00220 | serkin_6 | 185 | 456 | 6.0E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 185 | 461 | 39.297478 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 307 | 319 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 191 | 213 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 508 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 478 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59110.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010688888.1 | probable receptor-like protein kinase At2g42960 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7C9CA80 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology