Basic Information
Locus ID:
gene_2540
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_3_Chr_1 | 22818859 | 22819445 | - | gene_2540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 17,738.90 Da | 37.09 | 92.45 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021725911.1 | F-box protein At3g07870-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9R497 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_113930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 11 | gene_16218, gene_16226, gene_2540, gene_2541, gene_2830 ... |
| Amaranthaceae | Atriplex hortensis | 8 | Ah007104, Ah007689, Ah007690, Ah018643, Ah021126, Ah021127 ... |
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg15003, Sbi_jg15004, Sbi_jg15099, Sbi_jg29991 ... |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg26326, Seu_jg28588 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00020049, GOSA_00020050, GOSA_00020051 |
| Amaranthaceae | Suaeda glauca | 10 | Sgl01365, Sgl01366, Sgl06440, Sgl06519, Sgl06520, Sgl12989 ... |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000000314, gene:ENSEOMG00000003057 ... |
| Amaranthaceae | Chenopodium quinoa | 10 | CQ.Regalona.r1.2AG0015500, CQ.Regalona.r1.2AG0015510 ... |