Basic Information
Locus ID:
gene_25183
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 41111675 | 41118720 | + | gene_25183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 58,785.74 Da | 53.99 | 59.66 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 275 | 359 | 1.6E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 296 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 249 | - | - |
| Coils | Coil | Coil | 290 | 318 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25480.2 | - | 0 |
| RefSeq | XP_021738568.1 | protein WVD2-like 6 isoform X1 [Chenopodium quinoa] | 0 |
| Q0WSZ8 | Protein WVD2-like 6 OS=Arabidopsis thaliana OX=3702 GN=WDL6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RF06 | TPX2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology