Basic Information
Locus ID:
gene_25036
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
B3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 38618197 | 38627156 | + | gene_25036 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 60,303.71 Da | 40.49 | 76.39 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10017 | B3_DNA | 398 | 507 | 9.28967E-7 | IPR003340 |
| Pfam | PF03754 | Domain of unknown function (DUF313) | 391 | 483 | 6.3E-11 | IPR005508 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 396 | 504 | 8.63E-8 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 392 | 518 | 2.5E-12 | IPR015300 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_031116821.1 | uncharacterized protein LOC116020488 [Ipomoea triloba] | 0 |
| TrEMBL | A0A5E4E8A2 | PREDICTED: B3 OS=Prunus dulcis OX=3755 GN=ALMOND_2B031947 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 12 | gene_13763, gene_13765, gene_17629, gene_17723, gene_17724 ... |