Basic Information
Locus ID:
gene_24846
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Ordered Locus Names sll0103
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 32894315 | 32908864 | + | gene_24846 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 64,242.63 Da | 36.45 | 89.24 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 437 | 483 | 3.8E-8 | IPR032838 |
| Pfam | PF00092 | von Willebrand factor type A domain | 56 | 211 | 1.7E-17 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 54 | 215 | 2.88E-24 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 56 | 223 | 3.1E-31 | IPR036465 |
| SMART | SM00327 | VWA_4 | 54 | 225 | 1.2E-13 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 56 | 228 | 17.526001 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 581 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 581 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60710.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_028111068.1 | uncharacterized protein LOC114309525 [Camellia sinensis] | 0 |
| TrEMBL | A0A2P5FT01 | von Willebrand factor, type A OS=Trema orientale OX=63057 GN=TorRG33x02_031090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology