Basic Information
Locus ID:
gene_24845
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Ordered Locus Names sll0103
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 32879421 | 32883031 | + | gene_24845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 39,658.26 Da | 45.50 | 77.56 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 238 | 296 | 4.6E-8 | IPR032838 |
| SUPERFAMILY | SSF53300 | vWA-like | 63 | 163 | 1.38E-7 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 56 | 184 | 3.9E-13 | IPR036465 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 356 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_028067124.1 | E3 ubiquitin-protein ligase WAV3-like [Camellia sinensis] | 0 |
| TrEMBL | A0A7J7HM16 | VWFA domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_006759 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology