Basic Information
Locus ID:
gene_2479
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 85307525 | 85334987 | + | gene_2479 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 66,593.76 Da | 42.22 | 78.64 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18671 | PIN_PRORP-Zc3h12a-like | 409 | 532 | 2.32815E-63 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 79 | 310 | 3.4E-71 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 351 | 577 | 2.1E-73 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 369 | 543 | 8.0E-230 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 88 | 580 | 8.0E-230 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 89 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_002267905.2 | PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 [Vitis vinifera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7BWT7 | ribonuclease P OS=Davidia involucrata OX=16924 GN=Din_042576 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology