Basic Information
Locus ID:
gene_24720
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 27758318 | 27761829 | + | gene_24720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 69,948.78 Da | 37.62 | 93.10 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 361 | 624 | 8.78379E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 358 | 619 | 1.9E-35 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 80 | 128 | 2.6E-7 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 165 | 202 | 1.3E-6 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 64 | 2.7E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 211 | 3.33E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 359 | 620 | 3.01E-57 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 136 | 3.9E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 429 | 4.0E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 229 | 1.3E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 641 | 1.1E-47 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 625 | 31.396574 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 361 | 383 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 651 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_010670123.2 | probable inactive receptor kinase At3g02880 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R832 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_096350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology