Basic Information
Locus ID:
gene_24537
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 16962796 | 16971331 | + | gene_24537 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 58,703.75 Da | 48.91 | 68.54 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 232 | 375 | 2.3E-66 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 143 | 1.0E-55 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 7 | 145 | 4.74E-21 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 236 | 379 | 8.24E-21 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 6 | 145 | 3.3E-12 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 240 | 361 | 9.1E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 225 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_021856054.1 | uncharacterized protein LOC110795357 isoform X1 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9RBQ9 | DUF569 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_088580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology