Basic Information
Locus ID:
gene_2441
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 79584161 | 79588682 | + | gene_2441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 57,166.52 Da | 35.33 | 90.87 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 63 | 382 | 9.3E-73 | IPR000490 |
| Pfam | PF07983 | X8 domain | 400 | 471 | 8.3E-21 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 63 | 382 | 6.33E-79 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 62 | 387 | 1.3E-105 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 393 | 484 | 3.2E-11 | - |
| SMART | SM00768 | X8_cls | 399 | 485 | 3.3E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 297 | 310 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.3 | - | 0 |
| RefSeq | XP_010686818.1 | glucan endo-1,3-beta-glucosidase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0D2S3A2 | glucan endo-1,3-beta-D-glucosidase OS=Gossypium raimondii OX=29730 GN=B456_009G179400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology