Basic Information
Locus ID:
gene_24381
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
conserved protein UCP030365
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 12367363 | 12381197 | + | gene_24381 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 84,088.01 Da | 53.64 | 70.75 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 384 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 312 | - | - |
| Coils | Coil | Coil | 670 | 690 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05240.2 | - | 0 |
| RefSeq | XP_021861313.1 | uncharacterized protein LOC110800311 isoform X1 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9RG57 | AAA domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_075070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg10078, jg14190, jg34082, jg41099 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_24381 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah032097 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_2g042420, BVRB_3g062900 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg30125, Sbi_jg43579 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18323 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00004086 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl26187, Sgl66074, Sgl70389 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000019484, gene:ENSEOMG00000052109 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0002880, CQ.Regalona.r1.2BG0004060 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30178050 |
| Apiaceae | Apium graveolens | 4 | Ag10G02719, Ag1G00147, Ag2G02653, Ag3G01355 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G003730, contig69549873G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103708983, gene-LOC103721535 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_05.545.V1.1, AsparagusV1_07.528.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri18G25525, Ftri9G15657 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G40630.1, AT5G05240.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10013224m.g.v1.0, Thhalv10016481m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 3 | Sp4g22960.v2.2, Sp6g37590.v2.2, SpUn1366_0010.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB01g004730.2N, BniB02g055380.2N, BniB05g029230.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0026 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G0028 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno02g18260, gene.Cymno03g01870 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g02820 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1864 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1694 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00011618 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G06571 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.291, BH07.385, CH03.4530 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0100770, gene-QOZ80_2BG0154030 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0554280.1 |
| Poaceae | Oryza coarctata | 2 | Oco03G001800, Oco04G001670 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g03940.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G028300 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201421 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr06G035340, Chr0G011460, Chr0G011790, Chr15G026670 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G218500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG012190, gene_TRIDC6BG017510 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G095400.1, TraesCS6B02G123400.1 ... |
| Poaceae | Zea mays | 5 | Zm00001eb180710_P001, Zm00001eb191010_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-33793 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g12149, Zma_g14902 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG05.467, evm.TU.LG10.67, evm.TU.LG17.62 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g08690 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.299, evm.TU.Scaffold_4_RagTag.879 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14123, nbisL1-mrna-27461 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-12670, nbisL1-mrna-13885 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-14268, nbisL1-mrna-1515 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000005l.177, evm.TU.utg000008l.563 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00001171, Maker00010210 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-14343, nbisL1-mrna-422 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-18915, nbisL1-mrna-19357 |
| Salicaceae | Populus euphratica | 1 | populus_peu19156 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132611251 |
| Solanaceae | Solanum chilense | 1 | SOLCI003655800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021085 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.24182_chr05_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G4494 |
| Zosteraceae | Zostera marina | 2 | Zosma01g36330.v3.1, Zosma01g36340.v3.1 |