Basic Information
Locus ID:
gene_24221
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 9020579 | 9040402 | + | gene_24221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 48,756.91 Da | 53.36 | 87.89 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 76 | 315 | 1.08988E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 78 | 315 | 4.0E-50 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 331 | 4.86E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 74 | 322 | 3.7E-67 | - |
| SMART | SM00220 | serkin_6 | 45 | 315 | 1.8E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 322 | 39.014801 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 133 | 146 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 171 | 189 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 286 | 308 | 1.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 244 | 266 | 1.0E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04013 (MAPK signaling pathway - fly)
map04013 (MAPK signaling pathway - fly)
map04064 (NF-kappa B signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04214 (Apoptosis - fly)
map04214 (Apoptosis - fly)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
map04620 (Toll-like receptor signaling pathway)
map04621 (NOD-like receptor signaling pathway)
map04622 (RIG-I-like receptor signaling pathway)
ko04624 (Toll and Imd signaling pathway)
map04624 (Toll and Imd signaling pathway)
map04657 (IL-17 signaling pathway)
map04660 (T cell receptor signaling pathway)
map04668 (TNF signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66710.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009590482.1 | serine/threonine-protein kinase STY13-like [Nicotiana tomentosiformis] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9A5S0 | Dual-specificity kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology