Basic Information
Locus ID:
gene_23903
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 3936286 | 3940247 | + | gene_23903 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 59,581.35 Da | 38.53 | 83.53 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 206 | 481 | 1.6E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 483 | 1.35E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 283 | 489 | 3.4E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 165 | 282 | 8.4E-24 | - |
| SMART | SM00220 | serkin_6 | 205 | 485 | 7.5E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 205 | 491 | 37.785141 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 332 | 344 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37790.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010693922.2 | probable serine/threonine-protein kinase PBL7 [Beta vulgaris subsp. vulgaris] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R8V1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_093370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg30778, jg39857 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_23903, gene_7836 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah035581, Ah035587 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g027820 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21637, Sbi_jg22175 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16107 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00008717 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl34075, Sgl62657, Sgl67217, Sgl67278 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000017577, gene:ENSEOMG00000018218 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0018350, CQ.Regalona.r1.2BG0020020 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30190600 |
| Apiaceae | Apium graveolens | 1 | Ag9G01286 |
| Arecaceae | Cocos nucifera | 3 | COCNU_03G008170, COCNU_03G008180, COCNU_03G008520 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103701857, gene-LOC103721400 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.3690.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri13G17838 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G66460.1, AT5G37790.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10019672m.g.v1.0, Thhalv10027710m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp5g21520.v2.2, Sp7g04250.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB01g030130.2N, BniB03g043660.2N, BniB06g060680.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0657 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0632 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g09820 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g16760 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.579 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00013811, Pov_00029847 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G20900 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG05.739, evm.TU.LG06.810, evm.TU.LG11.37 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g21550 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.60356.8, evm.TU.Scaffold_3_RagTag.741 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-1219, nbisL1-mrna-16270 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-14025, nbisL1-mrna-7257 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-1119, nbisL1-mrna-6422 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000011l.837, evm.TU.utg000019l.763 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00008204, Maker00012508 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-13467, nbisL1-mrna-5231 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-13164, nbisL1-mrna-3954 |
| Salicaceae | Populus euphratica | 2 | populus_peu09637, populus_peu24885 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132622500, gene-LOC132623108 |
| Solanaceae | Solanum chilense | 2 | SOLCI001738100, SOLCI003445400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008893, gene-LOC107009349 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.139_chr01_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G0178 |
| Zosteraceae | Zostera marina | 1 | Zosma01g19470.v3.1 |