Basic Information
Locus ID:
gene_23856
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
cytochrome P450
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 3256511 | 3260370 | + | gene_23856 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 52,467.08 Da | 37.16 | 102.31 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00067 | Cytochrome P450 | 97 | 178 | 2.2E-5 | IPR001128 |
| Pfam | PF00067 | Cytochrome P450 | 202 | 449 | 1.9E-65 | IPR001128 |
| SUPERFAMILY | SSF48264 | Cytochrome P450 | 89 | 462 | 2.88E-87 | IPR036396 |
| Gene3D | G3DSA:1.10.630.10 | Cytochrome P450 | 187 | 466 | 2.9E-76 | IPR036396 |
| Gene3D | G3DSA:1.10.630.10 | Cytochrome P450 | 31 | 186 | 5.6E-14 | IPR036396 |
| ProSitePatterns | PS00086 | Cytochrome P450 cysteine heme-iron ligand signature. | 406 | 415 | - | IPR017972 |
| PRINTS | PR00465 | E-class P450 group IV signature | 413 | 431 | 2.6E-15 | IPR002403 |
| PRINTS | PR00465 | E-class P450 group IV signature | 322 | 338 | 2.6E-15 | IPR002403 |
| PRINTS | PR00465 | E-class P450 group IV signature | 266 | 292 | 2.6E-15 | IPR002403 |
| PRINTS | PR00465 | E-class P450 group IV signature | 397 | 413 | 2.6E-15 | IPR002403 |
| PRINTS | PR00385 | P450 superfamily signature | 404 | 413 | 8.4E-16 | IPR001128 |
| PRINTS | PR00385 | P450 superfamily signature | 413 | 424 | 8.4E-16 | IPR001128 |
| PRINTS | PR00385 | P450 superfamily signature | 327 | 338 | 8.4E-16 | IPR001128 |
| PRINTS | PR00385 | P450 superfamily signature | 275 | 292 | 8.4E-16 | IPR001128 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24910.1 | cytochrome P450, family 714, subfamily A, polypeptide 1. member of CYP714A | 0 |
| RefSeq | XP_010692015.2 | cytochrome P450 714C2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q2QYH7 | Cytochrome P450 714C2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYP714C2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9E091 | Cytochrome P450 714C2-like OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology