Basic Information
Locus ID:
gene_23845
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 3101093 | 3105947 | + | gene_23845 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 65,883.88 Da | 39.35 | 98.60 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 47 | 0.0022 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 108 | 342 | 7.46E-17 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 51 | 2.09E-10 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 112 | 365 | 4.1E-16 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 54 | 2.0E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59200.2 | - | 0 |
| RefSeq | XP_010693135.2 | uncharacterized protein LOC104906115 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q2V3N5 | F-box protein At3g59000 OS=Arabidopsis thaliana OX=3702 GN=At3g59000 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QA55 | F-box domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_207720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology