Basic Information
Locus ID:
gene_23714
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Oxidation resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_4_Chr_5 | 1147294 | 1153491 | + | gene_23714 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 40,352.56 Da | 48.78 | 76.52 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 211 | 348 | 9.1E-29 | IPR006571 |
| SMART | SM00584 | 109ultra | 185 | 349 | 3.4E-30 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 186 | 349 | 26.71719 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 147 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 174 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39870.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_010680553.1 | oxidation resistance protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9VIH7 | GTPase-activating protein skywalker OS=Drosophila melanogaster OX=7227 GN=sky PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QMK5 | TLDc domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_161920 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology