Basic Information
Locus ID:
gene_23595
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 44286353 | 44298314 | + | gene_23595 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 98,710.43 Da | 39.65 | 97.39 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 169 | 435 | 3.10961E-99 | - |
| Pfam | PF05633 | Protein BYPASS1-related | 570 | 676 | 2.8E-5 | IPR008511 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 166 | 434 | 8.5E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 144 | 435 | 8.47E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 239 | 449 | 5.7E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 139 | 238 | 6.3E-31 | - |
| SMART | SM00220 | serkin_6 | 163 | 440 | 8.7E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 163 | 440 | 36.922966 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 169 | 191 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 285 | 297 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 463 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021748219.1 | probable serine/threonine-protein kinase At1g01540 [Chenopodium quinoa] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J4ZED0 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_019265 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology