Basic Information
Locus ID:
gene_23497
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
D-arabinono-1,4-lactone oxidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 42786918 | 42800624 | + | gene_23497 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 122,072.94 Da | 52.82 | 68.67 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01565 | FAD binding domain | 581 | 714 | 4.6E-17 | IPR006094 |
| Pfam | PF13178 | Protein of unknown function (DUF4005) | 426 | 547 | 1.6E-21 | IPR025064 |
| Pfam | PF00612 | IQ calmodulin-binding motif | 143 | 163 | 6.5E-5 | IPR000048 |
| Pfam | PF04030 | D-arabinono-1,4-lactone oxidase | 914 | 1049 | 1.5E-9 | IPR007173 |
| Pfam | PF00612 | IQ calmodulin-binding motif | 169 | 185 | 0.1 | IPR000048 |
| SUPERFAMILY | SSF56176 | FAD-binding/transporter-associated domain-like | 572 | 754 | 3.13E-35 | IPR036318 |
| Gene3D | G3DSA:1.20.5.190 | - | 140 | 198 | 8.9E-9 | - |
| Gene3D | G3DSA:3.30.70.2520 | - | 913 | 1013 | 4.6E-5 | - |
| Gene3D | G3DSA:3.30.465.10 | - | 636 | 754 | 9.7E-33 | IPR016169 |
| SMART | SM00015 | iq_5 | 141 | 163 | 2.3E-5 | IPR000048 |
| SMART | SM00015 | iq_5 | 164 | 185 | 110.0 | IPR000048 |
| TIGRFAM | TIGR01677 | pln_FAD_oxido: plant-specific FAD-dependent oxidoreductase | 571 | 1099 | 2.5E-255 | IPR010030 |
| ProSiteProfiles | PS50096 | IQ motif profile. | 166 | 193 | 8.773 | IPR000048 |
| ProSiteProfiles | PS50096 | IQ motif profile. | 142 | 170 | 10.0906 | IPR000048 |
| ProSiteProfiles | PS51387 | PCMH-type FAD-binding domain profile. | 574 | 755 | 21.648382 | IPR016166 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 478 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 53 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46760.1 | D-arabinono-1,4-lactone oxidase family protein. | 0 |
| RefSeq | XP_048502760.1 | probable L-gulonolactone oxidase 6 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| O81032 | Probable L-gulonolactone oxidase 6 OS=Arabidopsis thaliana OX=3702 GN=GULLO6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9QNG5 | L-gulonolactone oxidase (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_165610 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology