Basic Information
Locus ID:
gene_23411
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 41594429 | 41608410 | + | gene_23411 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 201,376.69 Da | 46.85 | 80.09 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1310 | 1570 | 5.01181E-131 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 136 | 420 | 1.6E-22 | IPR002423 |
| Pfam | PF05078 | Protein of unknown function (DUF679) | 1636 | 1792 | 3.3E-53 | IPR007770 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1516 | 1568 | 1.3E-6 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1348 | 1514 | 5.6E-32 | IPR002498 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 163 | 415 | 5.49E-5 | IPR027410 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1284 | 1570 | 1.37E-73 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 213 | 396 | 1.54E-24 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1431 | 1571 | 2.6E-39 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 211 | 396 | 2.8E-31 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1287 | 1429 | 1.1E-33 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1292 | 1571 | 7.3E-82 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1241 | 1570 | 54.114635 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 1011 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1077 | 1137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 79 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1232 | 1258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 963 | 993 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1110 | 1125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1077 | 1109 | - | - |
| Coils | Coil | Coil | 871 | 891 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_010673144.2 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A803M574 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology