Basic Information
Locus ID:
gene_23410
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 41575869 | 41583532 | + | gene_23410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 145,913.38 Da | 44.33 | 83.34 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1011 | 1271 | 4.97168E-112 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 140 | 416 | 9.2E-22 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1050 | 1215 | 8.1E-26 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1002 | 1271 | 1.7E-61 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 202 | 387 | 1.28E-22 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 152 | 410 | 4.58E-5 | IPR027410 |
| Gene3D | G3DSA:3.30.810.10 | - | 1133 | 1272 | 5.2E-32 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 976 | 1130 | 1.1E-29 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 200 | 387 | 4.5E-29 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 984 | 1272 | 2.2E-56 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 945 | 1271 | 46.510227 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 936 | 958 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 70 | - | - |
| Coils | Coil | Coil | 768 | 788 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021760479.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Chenopodium quinoa] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A803M574 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology