Basic Information
Locus ID:
gene_23394
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 41270157 | 41275069 | + | gene_23394 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 86,277.11 Da | 55.67 | 75.27 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14131 | PKc_Mps1 | 413 | 708 | 8.76402E-165 | - |
| Pfam | PF00069 | Protein kinase domain | 415 | 708 | 1.3E-54 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 409 | 720 | 1.48E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 408 | 495 | 6.9E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 529 | 714 | 5.5E-50 | - |
| SMART | SM00220 | serkin_6 | 415 | 708 | 7.7E-69 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 708 | 39.990044 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 562 | 574 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 421 | 443 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 402 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 402 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77720.1 | putative protein kinase 1. Encodes a predicted protein kinase based on sequence similarity. | 0 |
| RefSeq | XP_010693425.2 | serine/threonine-protein kinase MPS1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q84VX4 | Serine/threonine-protein kinase MPS1 OS=Arabidopsis thaliana OX=3702 GN=MPS1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QQK4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_152760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg12135, jg23190 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23394 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah022586 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g000250 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4077, Sbi_jg49718 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5538 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022029 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl10474, Sgl15657, Sgl15727 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013550, gene:ENSEOMG00000036474 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0000290, CQ.Regalona.r1.2BG0028680 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30040160 |
| Apiaceae | Apium graveolens | 1 | Ag4G01242 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G006630, COCNU_03G007870 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103701911, gene-LOC103715254 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_03.1438.V1.1, AsparagusV1_03.1439.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri16G07254, Ftri9G03026, FtriNA02584, FtriNA21373 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G77720.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018161m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g32890.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g049920.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq09G1873 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl09G2041, Cgl09G2049 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g01840 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0006s00049.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g04240 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.957 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00021733 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb6G31266, Lb6G31307 |
| Poaceae | Echinochloa crus-galli | 4 | AH01.904, BH01.1033, CH01.1081, Contig309.116 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0219590, gene-QOZ80_3BG0264810 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0336440.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_062788 |
| Poaceae | Oryza coarctata | 2 | Oco05G021260, Oco06G022080 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g49750.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G110900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0104789 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr01G007380, Chr07G025660, Chr12G030090 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G076600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG042350, gene_TRIDC4BG006620 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G271800.2, TraesCS4B02G042200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb054400_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14765, nbis-gene-15869 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2985, Zma_g677 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.1939, evm.TU.LG06.397 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g31150 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_7_RagTag.1062, evm.TU.Scaffold_8_RagTag.673 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-9561 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-13960, nbisL1-mrna-525 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-18226, nbisL1-mrna-6885, nbisL1-mrna-6886 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000002l.806, evm.TU.utg000018l.563 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00003092, Maker00010620 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-2949, nbisL1-mrna-8168 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-20370, nbisL1-mrna-9879 |
| Salicaceae | Populus euphratica | 2 | populus_peu14694, populus_peu32367 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627046 |
| Solanaceae | Solanum chilense | 1 | SOLCI005841700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107003103 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_15061 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G2482 |
| Zosteraceae | Zostera marina | 1 | Zosma06g16690.v3.1 |