HalophFGD

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Basic Information
Locus ID: gene_23270
Species & Taxonomic ID: Mesembryanthemum crystallinum & 3544
Genome Assembly: Koichi Toyokura Assembly
Description: F-box protein At3g07870-like
Maps and Mapping Data
Chromosome Start End Strand ID
Super-Scaffold_2_Chr_2 39269716 39273184 + gene_23270
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.43 52,452.54 Da 40.38 96.62 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 18 89 1.14E-10 IPR036047
Gene3D G3DSA:1.20.1280.50 - 17 56 3.7E-5 -
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 167 401 1.6E-10 IPR017451
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G06240.1 F-box family protein. 0
RefSeq XP_010665977.2 F-box/kelch-repeat protein At3g23880 isoform X2 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot Q8GXC7 F-box/kelch-repeat protein At3g06240 OS=Arabidopsis thaliana OX=3702 GN=At3g06240 PE=2 SV=1 0
TrEMBL A0A0J8B5Z1 F-box domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_9g225210 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 8 gene_10790, gene_15721, gene_16719, gene_16720, gene_16746 ...
gene_1909, gene_23270, gene_23976
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.