Basic Information
Locus ID:
gene_23222
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 38509311 | 38512922 | + | gene_23222 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 73,202.29 Da | 27.95 | 100.55 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 141 | 200 | 2.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 65 | 4.7E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 406 | 666 | 1.0E-32 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 668 | 2.42E-52 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 23 | 237 | 1.36E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 175 | 2.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 247 | 2.5E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 481 | 671 | 4.8E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 479 | 1.9E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 669 | 27.198776 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 290 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021748439.1 | probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Chenopodium quinoa] | 0 |
| Q9LK03 | Proline-rich receptor-like protein kinase PERK2 OS=Arabidopsis thaliana OX=3702 GN=PERK2 PE=2 SV=3 | 0 | |
| TrEMBL | A0A803KYU7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology