Basic Information
Locus ID:
gene_22847
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 30195093 | 30198466 | + | gene_22847 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 34,137.25 Da | 43.24 | 99.77 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 215 | 298 | 4.3E-15 | IPR000719 |
| Pfam | PF14226 | non-haem dioxygenase in morphine synthesis N-terminal | 5 | 58 | 1.3E-10 | IPR026992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 188 | 299 | 1.68E-25 | IPR011009 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 4 | 67 | 8.93E-12 | - |
| Gene3D | G3DSA:2.60.120.330 | - | 1 | 75 | 2.0E-11 | IPR027443 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 198 | 292 | 1.2E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 214 | 299 | 15.820907 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 220 | 246 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010681113.2 | probable L-type lectin-domain containing receptor kinase S.5 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9EU56 | Protein kinase domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg265, jg28762, jg36600 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22847 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000011872 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 4 | nbisL1-mrna-5692, nbisL1-mrna-5695, nbisL1-mrna-5699 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0199250.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G012380 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1011800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC4BG055090 |
| Poaceae | Zea mays | 1 | Zm00001eb217820_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-58734, nbis-gene-58813 |