Basic Information
Locus ID:
gene_22592
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 17451885 | 17463297 | + | gene_22592 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 76,474.48 Da | 37.51 | 93.51 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 605 | 655 | 8.2E-18 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 165 | 574 | 8.7E-46 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 159 | 599 | 8.3E-97 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 34 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_021857110.1 | cationic amino acid transporter 1 [Spinacia oleracea] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZKX4 | AA_permease_C domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology