Basic Information
Locus ID:
gene_22548
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Short Name:
CIPK23
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 15421676 | 15430263 | + | gene_22548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 51,284.64 Da | 38.82 | 88.51 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 325 | 440 | 7.7171E-51 | - |
| CDD | cd14663 | STKc_SnRK3 | 19 | 274 | 4.9238E-177 | - |
| Pfam | PF00069 | Protein kinase domain | 20 | 275 | 3.2E-76 | IPR000719 |
| Pfam | PF03822 | NAF domain | 321 | 381 | 2.3E-20 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 17 | 309 | 6.74E-95 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 319 | 444 | 3.0E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 99 | 7.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 100 | 282 | 1.1E-64 | - |
| SMART | SM00220 | serkin_6 | 20 | 275 | 4.0E-109 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 319 | 343 | 12.454548 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 275 | 53.374943 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 139 | 151 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 26 | 49 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30270.2 | - | 0 |
| RefSeq | XP_010687109.1 | CBL-interacting serine/threonine-protein kinase 23 [Beta vulgaris subsp. vulgaris] | 0 |
| Q93VD3 | CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana OX=3702 GN=CIPK23 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2I7ZAT4 | non-specific serine/threonine protein kinase OS=Sesuvium portulacastrum OX=221166 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology