Basic Information
Locus ID:
gene_22337
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 8457033 | 8463366 | + | gene_22337 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 68,108.38 Da | 37.65 | 94.28 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 2.9E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 294 | 561 | 5.0E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 275 | 569 | 4.37E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 188 | 1.36E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 1.1E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 261 | 366 | 3.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 367 | 571 | 9.5E-60 | - |
| SMART | SM00220 | serkin_6 | 291 | 563 | 2.8E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 291 | 566 | 35.255154 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 297 | 319 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_052201434.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X2 [Diospyros lotus] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DKG8 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology