Basic Information
Locus ID:
gene_22325
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 8151356 | 8158688 | + | gene_22325 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 80,379.98 Da | 45.84 | 92.87 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 161 | 220 | 3.2E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 96 | 133 | 1.2E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 455 | 587 | 8.7E-12 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 105 | 239 | 3.91E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 447 | 700 | 7.9E-32 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 93 | 274 | 3.1E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 413 | 520 | 1.8E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 601 | 707 | 7.0E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 522 | 588 | 5.7E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 438 | 704 | 13.022374 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 280 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021723913.1 | protein MALE DISCOVERER 1-like [Chenopodium quinoa] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9B8X1 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology