Basic Information
Locus ID:
gene_22233
Species & Taxonomic ID:
Mesembryanthemum crystallinum & 3544
Genome Assembly:
Koichi Toyokura Assembly
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Super-Scaffold_2_Chr_2 | 5509417 | 5516444 | + | gene_22233 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 60,874.28 Da | 46.87 | 79.66 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 187 | 436 | 2.38168E-120 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 186 | 436 | 4.0E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 170 | 436 | 3.99E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 169 | 264 | 3.2E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 265 | 449 | 2.1E-61 | - |
| SMART | SM00220 | serkin_6 | 180 | 439 | 9.1E-61 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 180 | 440 | 42.435226 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 304 | 316 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 260 | 273 | 5.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 407 | 429 | 5.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 363 | 385 | 5.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 344 | 354 | 5.9E-19 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 298 | 316 | 5.9E-19 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 113 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021726458.1 | serine/threonine-protein kinase HT1-like [Chenopodium quinoa] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A125S655 | Serine/threonine and tyrosine kinase HT1 OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology